2010
Identification of new molecular markers for assembling the eukaryotic tree of life
Tekle YI, Grant JR, Kovner AM, Townsend JP, Katz LA. Identification of new molecular markers for assembling the eukaryotic tree of life. Molecular Phylogenetics And Evolution 2010, 55: 1177-1182. PMID: 20302952, DOI: 10.1016/j.ympev.2010.03.010.Peer-Reviewed Original ResearchMeSH KeywordsDatabases, ProteinEukaryotaEvolution, MolecularGenetic MarkersPhylogenySequence Analysis, DNAConceptsEukaryotic treePhylogenetic signalMolecular markersKey phylogenetic positionPhylogenetic informativeness profilesAppropriate molecular markersEukaryotic supergroupsUnicellular eukaryotesOrthologous groupsPhylogenomic analysisPhylogenetic positionNew molecular markersMolecular dataMultigene analysisMorphological charactersProtein databaseUniversal degenerate primersDegenerate primersLack of resolutionDeep branchWhole treeTreesEukaryotesDeep relationshipTargeted sampling
2008
The Phylogenetic Informativeness of Nucleotide and Amino Acid Sequences for Reconstructing the Vertebrate Tree
Townsend JP, López-Giráldez F, Friedman R. The Phylogenetic Informativeness of Nucleotide and Amino Acid Sequences for Reconstructing the Vertebrate Tree. Journal Of Molecular Evolution 2008, 67: 437-447. PMID: 18696029, DOI: 10.1007/s00239-008-9142-0.Peer-Reviewed Original ResearchConceptsAmino acid sequencePhylogenetic informativenessAcid sequenceVertebrate treeDNA sequencesMolecular evolutionary patternsEarly placental mammalsGenes c-mycDivergence timesMolecular evolutionPhylogenetic conflictEarly vertebratesEvolutionary patternsPlacental mammalsNucleotide sequenceMuroid rodentsFunctional constraintsGenesC-MycSupport valuesSequenceNucleotidesNumber of charactersHigh informativenessTrees