The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models
Shi L, Campbell G, Jones W, Campagne F, Wen Z, Walker S, Su Z, Chu T, Goodsaid F, Pusztai L, Shaughnessy J, Oberthuer A, Thomas R, Paules R, Fielden M, Barlogie B, Chen W, Du P, Fischer M, Furlanello C, Gallas B, Ge X, Megherbi D, Symmans W, Wang M, Zhang J, Bitter H, Brors B, Bushel P, Bylesjo M, Chen M, Cheng J, Cheng J, Chou J, Davison T, Delorenzi M, Deng Y, Devanarayan V, Dix D, Dopazo J, Dorff K, Elloumi F, Fan J, Fan S, Fan X, Fang H, Gonzaludo N, Hess K, Hong H, Huan J, Irizarry R, Judson R, Juraeva D, Lababidi S, Lambert C, Li L, Li Y, Li Z, Lin S, Liu G, Lobenhofer E, Luo J, Luo W, McCall M, Nikolsky Y, Pennello G, Perkins R, Philip R, Popovici V, Price N, Qian F, Scherer A, Shi T, Shi W, Sung J, Thierry-Mieg D, Thierry-Mieg J, Thodima V, Trygg J, Vishnuvajjala L, Wang S, Wu J, Wu Y, Xie Q, Yousef W, Zhang L, Zhang X, Zhong S, Zhou Y, Zhu S, Arasappan D, Bao W, Lucas A, Berthold F, Brennan R, Buness A, Catalano J, Chang C, Chen R, Cheng Y, Cui J, Czika W, Demichelis F, Deng X, Dosymbekov D, Eils R, Feng Y, Fostel J, Fulmer-Smentek S, Fuscoe J, Gatto L, Ge W, Goldstein D, Guo L, Halbert D, Han J, Harris S, Hatzis C, Herman D, Huang J, Jensen R, Jiang R, Johnson C, Jurman G, Kahlert Y, Khuder S, Kohl M, Li J, Li L, Li M, Li Q, Li S, Li Z, Liu J, Liu Y, Liu Z, Meng L, Madera M, Martinez-Murillo F, Medina I, Meehan J, Miclaus K, Moffitt R, Montaner D, Mukherjee P, Mulligan G, Neville P, Nikolskaya T, Ning B, Page G, Parker J, Parry R, Peng X, Peterson R, Phan J, Quanz B, Ren Y, Riccadonna S, Roter A, Samuelson F, Schumacher M, Shambaugh J, Shi Q, Shippy R, Si S, Smalter A, Sotiriou C, Soukup M, Staedtler F, Steiner G, Stokes T, Sun Q, Tan P, Tang R, Tezak Z, Thorn B, Tsyganova M, Turpaz Y, Vega S, Visintainer R, von Frese J, Wang C, Wang E, Wang J, Wang W, Westermann F, Willey J, Woods M, Wu S, Xiao N, Xu J, Xu L, Yang L, Zeng X, Zhang J, Zhang L, Zhang M, Zhao C, Puri R, Scherf U, Tong W, Wolfinger R. The MicroArray Quality Control (MAQC)-II study of common practices for the development and validation of microarray-based predictive models. Nature Biotechnology 2010, 28: 827-838. PMID: 20676074, PMCID: PMC3315840, DOI: 10.1038/nbt.1665.Peer-Reviewed Original ResearchConceptsInterpreting gene expression profilesMicroarray-based predictive modelsGene expression profilesQuality Control ConsortiumExpression profilesMicroarrayComputational toolsGenomic classifier
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