SplicerAV: a tool for mining microarray expression data for changes in RNA processing
Robinson TJ, Dinan MA, Dewhirst M, Garcia-Blanco MA, Pearson JL. SplicerAV: a tool for mining microarray expression data for changes in RNA processing. BMC Bioinformatics 2010, 11: 108. PMID: 20184770, PMCID: PMC2838864, DOI: 10.1186/1471-2105-11-108.Peer-Reviewed Original ResearchMeSH KeywordsAlgorithmsBiomarkers, TumorData MiningDatabases, GeneticGene Expression ProfilingNeoplasmsOligonucleotide Array Sequence AnalysisProtein IsoformsRNA, MessengerSoftwareConceptsIsoform changesMRNA processingGuanyl nucleotide exchange factorMicroarray datasetsMRNA processing factorsTranscript isoform abundanceAlternative mRNA processingHG-U133Expression of HRASUnknown mechanismMicroarray expression dataHuman mammary epithelial cellsGene expression microarraysMammary epithelial cellsRNA processingExchange factorBreast cancer microarray datasetsAffymetrix HG-U133Alternative mRNABreast tumorsEGFR activationGene expressionExpression microarraysCancer microarray datasetsSpecific expression