2023
Trellis tree-based analysis reveals stromal regulation of patient-derived organoid drug responses
Ramos Zapatero M, Tong A, Opzoomer J, O'Sullivan R, Cardoso Rodriguez F, Sufi J, Vlckova P, Nattress C, Qin X, Claus J, Hochhauser D, Krishnaswamy S, Tape C. Trellis tree-based analysis reveals stromal regulation of patient-derived organoid drug responses. Cell 2023, 186: 5606-5619.e24. PMID: 38065081, DOI: 10.1016/j.cell.2023.11.005.Peer-Reviewed Original Research
2015
Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm
Zunder ER, Finck R, Behbehani GK, Amir el-AD, Krishnaswamy S, Gonzalez VD, Lorang CG, Bjornson Z, Spitzer MH, Bodenmiller B, Fantl WJ, Pe'er D, Nolan GP. Palladium-based mass tag cell barcoding with a doublet-filtering scheme and single-cell deconvolution algorithm. Nature Protocols 2015, 10: 316-333. PMID: 25612231, PMCID: PMC4347881, DOI: 10.1038/nprot.2015.020.Peer-Reviewed Original Research