VDJML – tools for capturing the results of inferring immune receptor rearrangements
Toby I, Breden F, Buntzman A, Christley S, Corrie B, Fonner J, Gupta N, Hershberg U, Jordan C, Kim M, Kleinstein S, Marthandan N, Mock S, Monson N, Rounds W, Rojas M, Rosenfeld A, Rubelt F, Scarborough W, Scheuermann R, Scott J, Uduman M, Heiden J, Cowell L. VDJML – tools for capturing the results of inferring immune receptor rearrangements. The Journal Of Immunology 2016, 196: 209.24-209.24. DOI: 10.4049/jimmunol.196.supp.209.24.Peer-Reviewed Original ResearchFile formatOutput filesFile format standardsStandardized file formatDifferent file formatsStandardized formatApplication-agnostic mannerFormat standardsSoftware toolsCode contributionsCommand lineAnalysis applicationsImmune repertoire profilingAnalysis toolsDifferent labelsUsersFormatSoftwareFilesSuitePythonIgBLASTSharingToolWidespread use